Corn Lab

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1. summarizeOntDeletions summarizeOntDeletions Public

   Simple script for preprocessing amplicon ONT-seq data for further analysis of deletions.

   Shell 2

2. cortado cortado Public

   Cortado is a re-implementation of CRISPResso to assess editing outcomes in batches of samples of CRISPR/Cas experiments.

   Python 1

3. blender blender Public

   Forked from staciawyman/blender

   BLENDER is a companion program to the DISCOVER-Seq assay to identify off-target editing sites from MRE11 ChIP-Seq experiments.

   Python 1

4. retarget retarget Public

   Forked from lkmoeller/retarget

   Optimize HDR by Recursive Editing

   Python

5. bits bits Public

   Forked from yehcd/bits

   Basic ISCro4 target scoring (BITS) is a simple tool for analyzing next-generation sequencing (NGS) data from CUT&RUN experiments on ISCro4 recombinase to nominate and score potential off-target sites.

   R

6. rapid-tools rapid-tools Public

   Forked from yehcd/rapid-tools

   Analysis tools for next-generation sequencing data from the RaPID-seq system.

   R