Tool for visualizing GitHub profiles

A development version of the vioplot R package. This has been migrated to "vioplot" as version 0.3.

(Mostly) Perl scripts that do something related to phylogenomic analysis.

Successful Job Applications and Grants

Grabbing SUPPlementary DATA in R

cython + htslib == fast VCF and BCF processing

Codes related to studying male mutation bias across apes

Default shell settings

Site Identification from Short Read Sequences.

json-formatted specifications for unit testing frameworks

part of the tree-for-all hackathon

Interface to Open Tree of Life API

python port of taxize (taxonomy toolbelt) for R

⚠️ ARCHIVED ⚠️ Easily download and visualise climate data from CliFlo

An R interface to the Tree of Sex database (http://treeofsex.org/)

Data and analyses for publications and presentations.

C library for high-throughput sequencing data formats

talk with NCBI entrez using R

Resumes generated using the GitHub informations

C++ API & command-line toolkit for working with BAM data

Population genetics notes

ORF prediction of de novo transcriptome assemblies

A github repository following the legislative process in New Zealand

My PhD open research proposal

Differentiation statistics in R

My branch of Emmanuel Paradis' PEGAS library for phylogeography/popgen

Working directory of of my attempt to visualize fungi-host relationships in NZ forests

My branch of Biopython - with support for Arlequin sequence files

Code to manage phylogeny/phylogeography projects and write files for analysis