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Run marked pytest tests in grouped subprocesses (cross-platform).
A library to handle automated deprecations
Repository for the GOLIAT simulation source code and framework.
Deep CNN for Abdominal Adipose Tissue Segmentation on Dixon MRI
🩻 Whole-body CT segmentation made simple: 22,022 scans, 167 structures, one open solution.
An accurate, adaptable, and automated AI pipeline called non-human primates Brain Extraction and Segmentation Toolbox (nBEST) for processing NHPs from multi-species, multi-site, and multi-developme…
Tool for robust segmentation of >100 important anatomical structures in CT and MR images
Readable Conditional Denoising Diffusion
Robust Segmentation and Labeling of Vertebrae, Intervertebral Discs, Spinal Cord, and Spinal Canal in MRI Images Using nnU-Net and Iterative Algorithm.
Seamless operability between C++11 and Python
dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC
Baseline methods, training scripts, and pretrained models for LUMIR challenge at Learn2Reg 2024
🤗 Transformers: the model-definition framework for state-of-the-art machine learning models in text, vision, audio, and multimodal models, for both inference and training.
Slicer Extension for uniGradICON: A Foundation Model for Medical Image Registration
Install PyTorch distributions with computation backend auto-detection
High-order spline interpolation in PyTorch
nanobind: tiny and efficient C++/Python bindings
This is a segmentation pipeline to automatically, and robustly, segment the whole spine in T2w sagittal images.
Pointregistation for Nifftys
UKBB MRI semantic segmentation for Abdominal Dixon and other modalities