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Python sync/async framework for Interactive Brokers API

Python 3,285 874 Updated Mar 14, 2024

Remove OneNote page duplicates

C# 67 12 Updated Mar 12, 2026

R package to support Transcription Unit inference

R 1 Updated Oct 29, 2016

Paralleled GT-Scan for bulk data

Python 1 Updated Jun 8, 2018
R 1 Updated May 30, 2017

The R package for SVM with GPU architecture based on the GTSVM software

C++ 32 11 Updated Aug 4, 2021

Unrolled Generative Adversarial Networks

Jupyter Notebook 294 55 Updated Feb 23, 2018

Applied Computational Genomics Course at UU: Spring 2020

HTML 1,131 247 Updated Apr 5, 2024

BWK awk modified for biological data

C 643 116 Updated Aug 11, 2022

Deep Learning papers reading roadmap for anyone who are eager to learn this amazing tech!

Python 39,552 7,270 Updated Nov 27, 2022

A python extension for quick access to bigWig and bigBed files

C 250 56 Updated Jul 22, 2026

ChIP-seq analysis notes from Ming Tang

Python 852 307 Updated Aug 5, 2024

The Leek group guide to genomics papers

505 175 Updated Nov 5, 2018

RNA-seq aligner

C 2,232 548 Updated Mar 18, 2025

UCSC Genome Browser source. "beta" is released version / "master" is testing.

C 275 102 Updated Aug 14, 2026

Tools for visualizing genomics data

R 72 18 Updated Oct 26, 2021

Course materials for the Data Science Specialization: https://www.coursera.org/specialization/jhudatascience/1

HTML 4,151 30,946 Updated Mar 30, 2021

My fork of Alex Krizhevsky's cuda-convnet from 2013 where I added dropout, among other features.

Cuda 260 148 Updated Jan 23, 2015

Bioinformatics related demos and tutorials using the R programming language

R 236 116 Updated Apr 23, 2023

Python module for the easy handling and analysis of DNase-seq data

Python 38 24 Updated Jul 18, 2019

TF2: transcription factor binding site identification... using cooperativity

R 1 Updated Sep 27, 2015

Calculate a sort of 'information content' for data in bed format, by seeing how many unique positions are recovered as a function of the total read depth.

R 1 1 Updated Sep 27, 2015

MACS -- Model-based Analysis of ChIP-Seq

Python 783 275 Updated Jul 7, 2026

An easy-to-use automatic performance diagnosis and optimization tool for HPC applications

C++ 35 9 Updated Jan 25, 2018

GPU database engine

Cuda 1,167 120 Updated Jan 30, 2017

A powerful toolset for genome arithmetic.

C++ 143 84 Updated May 28, 2021

GenomeTools genome analysis system.

C 342 64 Updated Nov 10, 2025

C++ 11 implementation of Geoff Hinton's Deep Learning matlab code

C++ 284 145 Updated Sep 2, 2015

A library to quickly find visually similar images

C 266 67 Updated Aug 11, 2017

A free & open modern, fast email client with user-friendly encryption and privacy features

Python 8,822 1,003 Updated Nov 1, 2023
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