Skip to content
View drAbreu's full-sized avatar
5 followers · 2 following

Achievements

Achievement: StarstruckAchievement: YOLOAchievement: Pull Sharkx2Achievement: Quickdraw

Achievements

Achievement: StarstruckAchievement: YOLOAchievement: Pull Sharkx2Achievement: Quickdraw

Organizations

@source-data

Block or report drAbreu

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Maximum 250 characters. Please don’t include any personal information such as legal names or email addresses. Markdown is supported. This note will only be visible to you.
Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse
drAbreu/README.md

Typing SVG
ORCID

  • 👋 Hi, I’m @drAbreu, a Spanish nerdy metalhead that went from studying the cosmos to help improving the research of cosmos' ultimate wonder: life.

  • 🔭Astrophysicist 🤖AI/ML Developer 🧬🧫Molecular Biology ⚛Science communicator & Father

  • 👀 From telescopes to microscopes. I am an Astrophysicist working as a machine learning developer at EMBL, EMBO OpenScience Implementation and SourceData since April 2022.

  • 🥼 Passionate about science outreach

  • 🤗 NLP in biomedical sciences using Torch and HuggingFace

  • 📫 Reach me at jorge.abreu@embo.org

Pinned Loading

  1. alex-mcp alex-mcp Public

    MCP server for OpenAlex

    Python 53 9

  2. soda-seq2seq soda-seq2seq Public

    Generating bio NER and ER at scale using text generation

    Python

  3. biocypher/biochatter biocypher/biochatter Public

    Backend library for conversational AI in biomedicine

    Jupyter Notebook 217 58

  4. source-data/soda-model source-data/soda-model Public

    Python 2

  5. source-data/soda-curation source-data/soda-curation Public

    SODA Curation is a Streamlit application that provides a simple interface for uploading and processing ZIP files. It's designed to run in a Docker container with NVIDIA GPU support.

    Python 1

  6. source-data/soda_image_segmentation source-data/soda_image_segmentation Public

    Multimodal model to separate figure captions and their legends into their constituent panels

    Python