Stars
ripgrep recursively searches directories for a regex pattern while respecting your gitignore
Identification of errors in draft genome assemblies with single-base pair resolution for quality assessment and improvement
A visualization grammar and GPU-accelerated toolkit for genomic data
CGView.js creates interactive circular and linear genome maps.
Find and decompose genomic variation sites in pangenome graphs
To turn the exploration of graph genomes into an immersive, interactive, and usable iVR experience, we built a new VR application which we call "The Immersive Graph Genome Explorer" (IGGE). IGGE is…
TIPP3 and TIPP3-fast: new phylogeny-based metagenomic profiling and taxonomic identification tool.
MetaCompass: Reference-guided Assembly of Metagenomes
Automagic Python Bindings for the Open Graph Drawing Framework
Pan-genome inference and genotyping with long noisy or short accurate reads
Python interface to Graphviz graph drawing package
The Dagre layout for DAGs and trees for Cytoscape.js
Quickly and accurately render even the largest data.
Interactive network visualization in Python and Dash, powered by Cytoscape.js
The world's first (and hopefully last) pure-bash implementation of the LLL algorithm
A metagenome assembly and evaluation pipeline, focused on hi-fi long reads, but with support for lo-fi long reads and hybrid assemblies
Sequence and structure homology of proteins involved in microbial polyphosphate cycling
FizzBuzz Enterprise Edition is a no-nonsense implementation of FizzBuzz made by serious businessmen for serious business purposes.
Small C++ program to display images in a (modern) terminal using RGB ANSI codes and unicode block graphics characters