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Geometric deep learning of protein–DNA binding specificity

Python 80 9 Updated Mar 19, 2025
Python 39 4 Updated Oct 22, 2024

Pretrainable geometric graph neural network for antibody affinity maturation

Python 83 12 Updated Mar 18, 2025

MambaOut: Do We Really Need Mamba for Vision? (CVPR 2025)

Python 2,704 49 Updated Mar 9, 2025

Mamba SSM architecture

Python 18,749 1,798 Updated Jul 22, 2026
Python 5 2 Updated May 21, 2023

"Probabilistic Machine Learning" - a book series by Kevin Murphy

Jupyter Notebook 5,640 654 Updated Dec 10, 2025

Repository of notes, code and notebooks in Python for the book Pattern Recognition and Machine Learning by Christopher Bishop

Jupyter Notebook 2,628 544 Updated Jul 25, 2022

Probabilistic Machine Learning: Advanced Topics

1,540 138 Updated May 26, 2026

An awesome LaTeX template for NSFC proposal.

TeX 517 201 Updated Mar 16, 2026
Rich Text Format 8 3 Updated Apr 30, 2021

predicting peptide-protein interactions

Python 141 33 Updated Dec 23, 2023

Source Code for IJCAI'20 "KGNN: Knowledge Graph Neural Network for Drug-Drug Interaction Prediction"

Python 96 39 Updated Feb 11, 2021
Python 25 11 Updated Nov 8, 2021

Statistical Rethinking course winter 2022

R 4,106 433 Updated Mar 15, 2022
Jupyter Notebook 10 3 Updated Apr 11, 2022

Drug-Drug Interaction Predicting by Neural Network Using Integrated Similarity

Python 31 17 Updated Apr 4, 2021

深度学习经典、新论文逐段精读

33,698 2,808 Updated Mar 22, 2025

Rails frontend to The Genome Institute's drug gene interaction database.

Ruby 97 32 Updated Aug 12, 2025
Python 2 Updated May 5, 2020

DPDDI:a Deep Predictor for Drug-Drug Interactions

Python 9 5 Updated Jun 18, 2020

SkipGNN: Predicting Molecular Interactions with Skip-Graph Networks (Scientific Reports)

Jupyter Notebook 67 16 Updated May 9, 2020

The goal of this library is to generate more helpful exception messages for matrix algebra expressions for numpy, pytorch, jax, tensorflow, keras, fastai.

Jupyter Notebook 805 38 Updated Apr 7, 2022

Fast and Accurate ML in 3 Lines of Code

Python 10,602 1,176 Updated Aug 17, 2026

Graph Neural Network Library for PyTorch

Python 24,015 4,036 Updated Aug 17, 2026

Code and Datasets for "Predicting Drug-Disease Associations through Layer Attention Graph Convolutional Networks"

Python 55 15 Updated Feb 24, 2023

Residual networks implementation using Keras-1.0 functional API

Python 1,390 596 Updated Jan 12, 2021

Analysis notebooks and database interaction scripts for the nsides project

Jupyter Notebook 22 10 Updated Sep 13, 2024

Efficient and Friendly Graph Neural Network Library for TensorFlow 1.x and 2.x

Python 508 93 Updated Feb 10, 2026

Implementation of Graph Auto-Encoders in TensorFlow

Python 1,741 353 Updated Jan 3, 2020
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