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onnancheck

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Commits on Dec 12, 2019

• better diag print formatting

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Commits on Dec 11, 2019

• doc

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• set file-writing output NaN array check to not allow even a single NaN

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• don't check ghost cells for NaN

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• functionalize, parameterize NaN array count check

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• hdf5: check for any NaN after writing each time step

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• refine error messages and do more checks

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Commits on Dec 10, 2019

• early check: number of MPI images is a factor of non-degenerate LX2 and LX3

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• check source file exists before copy

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• use build system instead of preprocessor

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Commits on Dec 9, 2019

• io:input: check right away if necessary input directories exist

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Commits on Nov 13, 2019

• multifluid.f90/ionization.f90 ionrate_glow98 must be a subroutine

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• fortran: format comments

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Commits on Nov 12, 2019

• matlab: aurora hdf5 plots

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• aurora: output in HDF5 format

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Commits on Nov 7, 2019

• updated magcalc.f90 and related routines so they work with newer code

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Commits on Nov 4, 2019

• cmake: link glow as ExternalProject instead of FetchContent

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• cmake: cleanup all functions

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• cmake: OK with h5fortran

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• cmake: initial HDF5

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• initial HDF5 output only

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Commits on Oct 28, 2019

• syntax cleanup

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• Squashed commit of the following:

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Commits on Oct 2, 2019

• may have fixed the checkerboarding of iver output (still don't completely understand why this was happening)

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• some tweaks to accommodate np=1

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• permuted with 2d glow output fixed

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Commits on Sep 17, 2019

• default lapack real32+real64 for polymorph w/o preprocesssor

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Commits on Sep 11, 2019

• ensure unused directory names are allocated empty to avoid runtime errors

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• ini => nml

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Commits on Aug 30, 2019

• test: skip rollover 366 day test for real32

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Commits on Aug 26, 2019

• move formats.f90 within timeutils.f90. Handle utsec==86400 filename case by wrapping day.

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• fortran: enhance dateinc() to correctly handle indefinitely large/long time duration, including UTsec + year from simulation start

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Commits on Aug 25, 2019

• default to not use feature if flag not set in .ini, instead of erroring

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• reading config.ini-default to no Glow if glow flags not specified

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Commits on Aug 23, 2019

• manual merge of 3dinterp

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