有趣的Python爬虫和Python数据分析小项目(Some interesting Python crawlers and data analysis projects)

标注自己的数据集，训练、评估、测试、部署自己的人工智能算法

A library for creating complex UpSet plots with ggplot2 geoms

GWAS Tutorial for Beginners

Source code and data analyses for the Sci-Hub Coverage Study

Visualizations based on best open science practices.

Deep learning based processing of Atac-seq data

Deep learning framework for SV calling and genotyping

Transformer-based sequence correction method for genome assembly polishing

Materials for Spring 2018 Applied Genomics Course

ProtNote is a multimodal deep learning model that leverages free-form text to enable both supervised and zero-shot protein function prediction

A fast tool for detecting and decomposing segmental duplications in genome assemblies

SyntenyFinder contains a collection of scripts for performing and visualizing macrosynteny analyses. It supports annotated chromosome-level genome assemblies from NCBI and offers customization opti…

Inpactor2: LTR retrotransposon detector and classificator using Deep Learning

Reference Phylogeny for Bacterial and Archaeal Genomes

Post-verkko graph and assembly curation in Python.

Pipelines for using T2T genome as a reference

Phylogenetic profiling with orthology data

Classify chimeric reads based on unique kmer contents

A fast and effective high-order diploid human 3D genome construction method

Infer demography, mutation, and selection from millions of genomes

This repository contains the folders of the tools MOnSTER and PRO-MOCA