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  1. AMPLIFIED AMPLIFIED Public

    Forked from hesamhakim/AMPLIFIED

    Automated Amplicon-based NGS Pipeline for Clinical Specimens

    Jupyter Notebook 1

  2. HPO-Mapper HPO-Mapper Public

    HPOMapper is an AI-powered clinical phenotyping tool that automatically extracts Human Phenotype Ontology (HPO)terms from unstructured clinical notes.

    Jupyter Notebook 1

  3. taxprofiler taxprofiler Public

    Forked from nf-core/taxprofiler

    Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data

    Nextflow

  4. taxprofiler-dashboard taxprofiler-dashboard Public

  5. vcf2table vcf2table Public

    VCF to tabular format converter. Harmonizes different VCF formats

  6. Rej-Detect2 Rej-Detect2 Public

    Forked from hesamhakim/Rej-Detect2

    Rej-Detect (mtDNA Mixture Detection)

    Jupyter Notebook