Python module for parsing, analyzing, and manipulating GEDCOM files

File your issues here, regardless of repo until we get all our repos squared away; we don't want to miss anything.

To test and learn git

Novel Coronavirus (COVID-19) Cases, provided by JHU CSSE

COVID19 case numbers of Cantons of Switzerland and Principality of Liechtenstein (FL). The data is updated at best once a day (times of collection and update may vary). Start with the README.

Python library to handle Scanning Probe Microscopy Images. Can read nanoscan .xml data, Bruker AFM images, Nanonis SXM files as well as iontof images(ITA, ITM and ITS).

Nixnote - Evernote desktop client for Linux

General Information about CompMS Activities

A collection of available Python tools for Proteomics analysis

Libraries for fine isotopic structure calculator.

This is a R package for alignment of DIA mass-spec data

The codebase of the OpenMS project

C library for high-throughput sequencing data formats

Sequence to Medical Phenotypes: A pipeline featuring variant annotation, prioritization, pharmacogenomics, and tools for analyzing genomic trios (mother, father, child).

This is the git repository matching the Bioconductor package mzR: parser for netCDF, mzXML, mzData and mzML files (mass spectrometry data)

local metabolite database

Galaxy Tool Shed repositories maintained and developed by the GalaxyP community

SWATH Evaluation manuscript is a repo to share the data related with the Evaluation of different platforms to analyze SWATH data

Some hopefully useful tools for mass spectrometry applied to proteomics

A Perl module and terminal command for generating secure memorable passwords inspired by the fabulous XKCD web comic and Steve Gibson's Password Hay Stacks. This is the library that powers www.xkpa…

Makes tests easy on the fingers and the eyes

Generates Python Extension modules from Cythons PXD files

The codebase of the OpenMS project

pyMSA - Python tools for Open Mass Spectrometry

Implementations of compression schemes for numeric data from mass spectrometers.

Semi-supervised learning for peptide identification from shotgun proteomics datasets

Python application and framework for reanalyzing peptide-spectrum-matches (PSMs).

pymzML - an interface between Python and mzML Mass spectrometry Files

Generates Python Extension modules from Cythons PXD files