Skip to content
View jacobwindsor's full-sized avatar
🏠
Working from home
🏠
Working from home

Highlights

  • Pro

Block or report jacobwindsor

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Maximum 250 characters. Please don’t include any personal information such as legal names or email addresses. Markdown is supported. This note will only be visible to you.
Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse
Showing results

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

Python 3,769 797 Updated Mar 19, 2026

A cross-platform command-line utility that creates projects from cookiecutters (project templates), e.g. Python package projects, C projects.

Python 25,031 2,258 Updated Apr 1, 2026

Official home of genome aligner based upon notion of Cactus graphs

Python 697 126 Updated Jul 27, 2026

A project aiming "to significantly advance the state of the art with regard to indexing and querying biomedical data with freely available open source software"

Java 11 3 Updated Jul 30, 2024

Temporary repository of RDF of selected pathways from WikiPathways, supporting the Wikidata bot.

Java 2 3 Updated Dec 30, 2024

Create Standalone Installable Shiny Apps

R 269 36 Updated Aug 28, 2025

WIP: Electron and R shiny

JavaScript 7 5 Updated May 28, 2020

Non-parametric, asymptotic P-value computation for multivariate linear models

R 16 Updated Oct 16, 2023

Tool for the Quality Control of Long-Read Defined Transcriptomes

Python 275 64 Updated Jul 27, 2026

A Nextflow pipeline for running the ARTIC network's fieldbioinformatics tools (https://github.com/artic-network/fieldbioinformatics), with a focus on ncov2019

Nextflow 91 87 Updated Nov 8, 2023

Estimation of underreported cases of COVID19 outbreak

2 Updated Jun 16, 2020

COVID-19 Biohackathon April 5-11 2020

241 31 Updated May 28, 2020

📦 🔥 Python project management. Manage packages: convert between formats, lock, install, resolve, isolate, test, build graph, show outdated, audit. Manage venvs, build package, bump version.

Python 1,786 116 Updated Jan 11, 2021

bedtools - the swiss army knife for genome arithmetic

C 1,042 292 Updated Jun 10, 2026

Official git repository for Biopython (originally converted from CVS)

Python 5,139 1,927 Updated Jul 28, 2026

Text of government takedown notices as received. GitHub does not endorse or adopt any assertion contained in the following notices.

3,179 182 Updated May 12, 2026

Scientific python course material for two days.

Jupyter Notebook 2 1 Updated Sep 19, 2019

A bundler for javascript and friends. Packs many modules into a few bundled assets. Code Splitting allows for loading parts of the application on demand. Through "loaders", modules can be CommonJs,…

JavaScript 65,861 9,440 Updated Jul 28, 2026

Extraordinary JavaScript UI framework with unique declarative and functional architecture

JavaScript 3,176 89 Updated Jun 16, 2026

A description of React's new core algorithm, React Fiber

12,988 755 Updated Jul 2, 2024

A simple and composable way to validate data in JavaScript (and TypeScript).

TypeScript 7,138 222 Updated Oct 1, 2024

Cheatsheet for the JavaScript knowledge you will frequently encounter in modern projects.

25,626 3,153 Updated Oct 15, 2024

Flutter makes it easy and fast to build beautiful apps for mobile and beyond

Dart 177,950 30,802 Updated Jul 28, 2026

A simple, beautiful, and embeddable JavaScript Markdown editor. Delightful editing for beginners and experts alike. Features built-in autosaving and spell checking.

JavaScript 10,143 1,091 Updated Jun 11, 2024

Citation.js converts formats like BibTeX, Wikidata JSON and ContentMine JSON to CSL-JSON to convert to other formats like APA, Vancouver and back to BibTeX.

JavaScript 239 28 Updated Jul 13, 2026

OOP is better with stamps: Composable object factories.

TypeScript 3,008 103 Updated Jul 17, 2026

Cite references in Showdown

JavaScript 5 Updated Jun 3, 2023

Mostly adequate guide to FP (in javascript)

JavaScript 23,834 1,880 Updated Sep 17, 2024

React components for Velocity.js

JavaScript 2,919 158 Updated May 9, 2019

A graphql API for the gun p2p graph database

JavaScript 406 19 Updated Jan 6, 2023
Next