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@holman does dotfiles

Shell 7,743 3,249 Updated Jun 16, 2026

SciQLop is an ergonomic and efficient application to browse and label in situ plasma measurements from multi-mission satellite data.

Jupyter Notebook 29 5 Updated Jun 18, 2026

Metadata of MoBIE project and according python scripts

Jupyter Notebook 7 Updated Sep 25, 2025

Specification and examples of Capability Manifests

Python 3 Updated May 18, 2026

A recast of cell segmentation models built on the Burn deep learning framework.

Rust 22 1 Updated Jun 17, 2026

Export ALL your data from Apple Photos

Swift 288 8 Updated Apr 27, 2026
Python 2 Updated Sep 24, 2025

🎉 Triage Party: massively multi-player GitHub triage 🎉

Go 533 84 Updated Apr 2, 2026

Cell tracking and segmentation software

Python 178 26 Updated Jun 3, 2026

Obsidian.md plugin to sync highlights/notes from koreader

TypeScript 121 10 Updated Jan 23, 2026

de-pixelate youtube video gaV-O6NPWrI

Jupyter Notebook 1,491 152 Updated Jul 10, 2025

A plugin to read whole slide images within napari.

Python 21 2 Updated Nov 24, 2025

Some tools for neuronal image analysis

Python 42 5 Updated Apr 8, 2026

MovingPandas - a Python library for movement data exploration and analysis

Python 1,397 210 Updated Apr 23, 2026

Tools for the analysis of movement data

Jupyter Notebook 154 9 Updated Apr 1, 2026

Deep-learning library for image restoration.

Python 141 22 Updated Jun 17, 2026
Python 1 Updated Apr 9, 2026

Create web-based OME-Zarr galleries

TypeScript 25 Updated May 26, 2026

Curated resources for inclusive collaboration in open science.

28 7 Updated Feb 16, 2025

Arduino library to transmit WWVB and JJY with a 40kHz or 60kHz carrier

C++ 44 5 Updated Sep 25, 2020

🎀 Awesome Zarr resources

94 2 Updated Jun 14, 2024

Infinite canvas drawing/whiteboarding app for Windows, Linux and macOS. Made with Godot.

GDScript 6,692 303 Updated Sep 22, 2025

A Python toolbox for aligning / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.

Jupyter Notebook 118 17 Updated Jun 2, 2026

An R-Tree implementation

Python 2 Updated Apr 25, 2024

K3D lets you create 3D plots backed by WebGL with high-level API (surfaces, isosurfaces, voxels, mesh, cloud points, vtk objects, volume renderer, colormaps, etc). The primary aim of K3D-jupyter is…

Python 1,029 126 Updated Apr 2, 2026

pipeline to modify tracking data in napari

Python 4 Updated Nov 7, 2024

An ultra-light MacOS utility that helps hide menu bar icons

Swift 14,205 419 Updated Jun 15, 2026

Type annotations for specifying, validating, and serializing arrays with arbitrary backends in Pydantic (and beyond)

Python 144 6 Updated Jun 12, 2026

Affinity based image segmentation system

C++ 6 4 Updated May 15, 2026

"every time I watch one of his talks I feel like someone has gone in and organized my brain"

HTML 3,172 98 Updated Feb 9, 2025
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