Skip to content
View jni's full-sized avatar

Sponsoring

@fregante
@zulip

Organizations

@scikit-image @napari

Block or report jni

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Maximum 250 characters. Please donโ€™t include any personal information such as legal names or email addresses. Markdown is supported. This note will only be visible to you.
Report abuse

Contact GitHub support about this userโ€™s behavior. Learn more about reporting abuse.

Report abuse
Showing results

Distributed Python made easy.

Python 70 1 Updated Aug 1, 2026

Image registration and ROI matching for microscopy images using nuclei constellations

Jupyter Notebook 13 Updated Jul 7, 2026

@holman does dotfiles

Shell 7,754 3,235 Updated Jun 25, 2026

SciQLop is an ergonomic and efficient application to browse and label in situ plasma measurements from multi-mission satellite data.

Jupyter Notebook 29 5 Updated Jul 26, 2026

Metadata of MoBIE project and according python scripts

Jupyter Notebook 7 Updated Sep 25, 2025

Specification and examples of Capability Manifests

Python 3 Updated May 18, 2026

A recast of cell segmentation models built on the Burn deep learning framework.

Rust 23 1 Updated Jul 30, 2026

Export ALL your data from Apple Photos

Swift 293 9 Updated Jul 9, 2026
Python 2 Updated Aug 3, 2026

๐ŸŽ‰ Triage Party: massively multi-player GitHub triage ๐ŸŽ‰

Go 536 86 Updated Jul 8, 2026

Cell tracking and segmentation software

Python 201 30 Updated Jul 15, 2026

Obsidian.md plugin to sync highlights/notes from koreader

TypeScript 123 10 Updated Jan 23, 2026

de-pixelate youtube video gaV-O6NPWrI

Jupyter Notebook 1,498 152 Updated Jul 10, 2025

A plugin to read whole slide images within napari.

Python 21 2 Updated Nov 24, 2025

Some tools for neuronal image analysis

Python 43 5 Updated Apr 8, 2026

MovingPandas - a Python library for movement data exploration and analysis

Python 1,405 212 Updated Jul 30, 2026

Tools for the analysis of movement data

Jupyter Notebook 155 9 Updated Apr 1, 2026

Deep-learning library for image restoration.

Python 148 23 Updated Aug 3, 2026
Python 1 Updated Apr 9, 2026

Create web-based OME-Zarr galleries

TypeScript 26 Updated Jul 7, 2026

Curated resources for inclusive collaboration in open science.

28 7 Updated Feb 16, 2025

Arduino library to transmit WWVB and JJY with a 40kHz or 60kHz carrier

C++ 45 5 Updated Sep 25, 2020

๐ŸŽ€ Awesome Zarr resources

94 2 Updated Jun 14, 2024

Infinite canvas drawing/whiteboarding app for Windows, Linux and macOS. Made with Godot.

GDScript 6,747 304 Updated Sep 22, 2025

A Python toolbox for aligning / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.

Jupyter Notebook 129 17 Updated Aug 3, 2026

An R-Tree implementation

Python 2 Updated Apr 25, 2024

K3D lets you create 3D plots backed by WebGL with high-level API (surfaces, isosurfaces, voxels, mesh, cloud points, vtk objects, volume renderer, colormaps, etc). The primary aim of K3D-jupyter isโ€ฆ

Python 1,028 125 Updated Apr 2, 2026

pipeline to modify tracking data in napari

Python 4 Updated Nov 7, 2024

An ultra-light MacOS utility that helps hide menu bar icons

Swift 14,515 447 Updated Jun 15, 2026

Type annotations for specifying, validating, and serializing arrays with arbitrary backends in Pydantic (and beyond)

Python 149 6 Updated Aug 1, 2026
Next