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Starred repositories

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Crystal’s GC, written in Crystal.

Crystal 67 2 Updated Aug 7, 2026

Molecular Oncology Almanac, a clinical interpretation algorithm paired with a novel underlying knowledge base for precision cancer medicine

HTML 44 7 Updated Jul 9, 2026

An R implementation of the UpSet set visualization technique published by Lex, Gehlenborg, et al..

HTML 839 164 Updated May 20, 2026

libui-ng: a portable GUI library for C. "libui for the next generation"

C 1 Updated Jun 26, 2026

In this repository, the LANA Project has published its July 2026 report “Project LANA Interim Report on IUT Theory.”

TeX 15 Updated Jul 20, 2026

Apache ECharts is a powerful, interactive charting and data visualization library for browser

TypeScript 67,008 19,812 Updated Aug 4, 2026

A virtual filesystem for Crystal: unify directories and archives into a single tree with compression, encryption, and chunked storage.

Crystal 12 Updated Jul 20, 2026

A terminal EPUB / PDF Book Reader (+djvu)

Rust 1,077 56 Updated Aug 8, 2026

Cross-platform base and user directories (UNIX, macOS, Windows)

Crystal 7 Updated Jul 5, 2026

Unofficial Python API and agentic skill for Google Gemini Notebook. Full programmatic access to NotebookLM's features—including capabilities the web UI doesn't expose—via Python, CLI, and AI agents…

Python 18,559 2,495 Updated Aug 8, 2026

Multi-omic single-cell optimal transport tools

Python 214 16 Updated Aug 3, 2026

Multimodal Data (.h5mu) implementation for Python

Python 129 23 Updated Aug 7, 2026

Scaling Single Cell Analysis to Millions of Cells

C++ 299 34 Updated Jul 13, 2026

LIANA+: an all-in-one framework for cell-cell communication

Python 310 36 Updated Jul 16, 2026

Single cell trajectory detection

Jupyter Notebook 331 65 Updated Jul 15, 2026

Clustering scRNAseq by genotypes

Python 212 54 Updated Apr 30, 2026

R package for DNA methylation analysis

R 260 105 Updated Jul 15, 2026

📺🗿 Terminal graphics for the 21st century.

C 5,114 115 Updated Jul 26, 2026

Definition of link data for TogoID

HTML 15 12 Updated Aug 8, 2026

Frontend of DDBJ Search

TypeScript 1 Updated Jul 21, 2026
Python 1 Updated Jul 28, 2026
1 Updated Jul 21, 2026
Python 1 Updated Jul 1, 2026

Download sequencing data and metadata from GSA, SRA, ENA, and DDBJ databases.

Shell 253 18 Updated Aug 4, 2026

Fast, self-contained VCF to MAF converter with embedded annotation (Rust rewrite of vcf2maf)

Rust 18 1 Updated Jun 23, 2026

ClairS: a deep-learning method for long-read tumor–normal pair somatic small variant calling

Python 112 12 Updated Jul 17, 2026

Bloom-filter based minimal perfect hash function library

C++ 281 31 Updated Jul 16, 2025

A rich terminal UI for GitHub that doesn't break your flow.

Go 12,267 430 Updated Aug 1, 2026

A monitor of resources

C++ 33,878 1,109 Updated Aug 7, 2026
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