A false-positive filter for variants called from massively parallel sequencing

Feature Selection Simulation Files

Record terminal sessions as SVG animations

Free monospaced font with programming ligatures

simple tools for data cleaning in R

R package to estimate q-values and false discovery rate quantities.

A small R package to make sequencing read coverage plots in R.

Sublime Text plugin for creating new Gists from selected text

Google Spreadsheets R API

Identifying recurrent mutations in cancer

A list of cool features of Git and GitHub.

The Genome Modeling System installer

🌸 A command-line fuzzy finder

Copy number variant detection from targeted DNA sequencing

A cd command that learns - easily navigate directories from the command line

Useful bash one-liners for bioinformatics.

RNA-seq aligner

A curated list of awesome R packages, frameworks and software.

Short, simple, direct scripts for creating ASCII graphical histograms in the terminal.

z - jump around

Count bases in BAM/CRAM files

A low-key, adjustable colorscheme for vim – GitHub mirror

miscellaneous scripts for bioinformatics/genomics that dont merit their own repo.

The Open Source Data Science Masters

Graph and network visualization using tabular data in R

A visualization of the call log and map from the Serial podcast, using ggvis and Shiny.

A suite of utilities for converting to and working with CSV, the king of tabular file formats.

A functional programming toolkit for R

Python 2.7 Regular Expression cheatsheet, as a restructured text document and Makefile to convert it to PDF

ggplot port for python