Stars
A collection of resources to filter 'bad' probes from the Illumina 450k and EPIC methylation arrays
Bringing Old Photo Back to Life (CVPR 2020 oral)
An introduction about the Genome-in-a-Bottle project
NGMLR is a long-read mapper designed to align PacBio or Oxford Nanopore (standard and ultra-long) to a reference genome with a focus on reads that span structural variations
Open workflow definitions for genomic analysis from MGI at WUSM.
Dockerfile with several builds of R for memory/thread debugging
A curated and summarized list of bioinformatics bench-marking papers and resources.
DNA methylation analysis downstream to Nanopolish for Oxford Nanopore DNA sequencing datasets
CWL CommandLineTool descriptions for biology/life-sciences related applications
An open-source, cloud-ready web application for simplified deployment of big data workflows.
A curated list of awesome pipeline toolkits inspired by Awesome Sysadmin
Workflows for processing of ATAC-seq Data based on the Common Workflow Language (CWL)
Workflows for processing of ChIP-seq, ChIPmentation, and Cut&Run data based on the Common Workflow Language
A public list of computational methods for cell type inference from genome-scale DNA methylation data