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The official GitHub page for the survey paper "A Survey of Large Language Models".

Anime Girls Holding Programming Books

LLM training in simple, raw C/CUDA

gRNAde is a Generative AI framework for inverse design of 3D RNA structure and function

Grok open release

A framework for training graph neural networks to untangle assembly graphs obtained from OLC-based de novo genome assemblers.

RiboNucleic Acid (RNA) Language Model

Telomere-to-Telomere diploid Indian Genome

Telomere-to-Telomere diploid Indian Genome

HERRO is a highly-accurate, haplotype-aware, deep-learning tool for error correction of Nanopore R10.4.1 or R9.4.1 reads (read length of >= 10 kbps is recommended).

21 Lessons, Get Started Building with Generative AI

Any Way to Show Multi genomic Synteny

Tool to plot synteny and structural rearrangements between genomes

List of papers on ICML2023.

Advanced Python Mastery (course by @dabeaz)

Toolkit for processing sequences in FASTA/Q formats

PBSIM3: a simulator for all types of PacBio and ONT long reads

Open Data Platform for analysts, quants and AI agents.

List of papers studying machine learning through the lens of category theory

[NeurIPS'22] Tokenized Graph Transformer (TokenGT), in PyTorch

Solve puzzles. Learn CUDA.

Hifiasm: a haplotype-resolved assembler for accurate Hifi reads

The complete sequence of a human genome

Google Drive public file downloader when curl/wget fails.

Python package built to ease deep learning on graph, on top of existing DL frameworks.

Code for GPT-4chan

A tool for summarizing, extracting, generating and modifying DNA sequences.

Examples of how to create colorful, annotated equations in Latex using Tikz.

minimizer extraction with python bindings