Artistic and nature-inspired colour palettes for R, on CRAN as 'ltc'. Curated for clarity and impact in scientific figures.

A Python package for pharmacogenomics (PGx) research

Direct and INdirect analysis of Genetic lOci

Library of R tools for common analyses

Generate synthetic EHR, genomics, imaging, and other data types from Python.

The Pharmacogenomic Clinical Annotation Tool

HGVS Nomenclature website

Phenotyping algorithms for common biomarkers in primary care EHR for UK Biobank

LocusCompareR is a R package with visualization tools for comparing two genetic association datasets.

Synthetic data generator for the Our Future Health cohort

Tools to perform ancestry projection to a reference dataset within the calculator pipeline (pgsc_calc)

This repository is my collection of pipelines for basic GWAS analysis, written in R to simplify, please cite original tools/approaches referred in the pipelines.

R package for the estimation of causal effects.

Opinionated `ggplot2` extension package to automatically choose the best chart type and styling.

Code for: Grip Strength: Are Some Adiposity Phenotypes More Detrimental Than Others? A Mendelian Randomization Study

Polygenic Risk Scores Extension for Diabetes Mellitus (PRSedm)

An R package implementing the UMAP dimensionality reduction method.

phenofhy is a Python package for phenotype analysis in the Our Future Health trusted research environment

An R package providing extensions that enhance the capabilities of the DNA nexus command line utilities

DNAnexus applet to run a script as a job

LDBlockShow: a fast and convenient tool for visualizing linkage disequilibrium and haplotype blocks based on VCF files

Multi-ancestry Conditional and Joint Analysis of GWAS summary statistics

Estimate age-dependent genetic and environmental components of disease architecture

Accessing AlphaMissense Data Resources in R