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Starred repositories
Persistent terminal sessions for Cursor & VS Code via tmux
A pipen CLI plugin to run commands via Google Cloud Batch.
Performs memory-efficient reservoir sampling on very large input files delimited by newlines
The lightweight in-page chatbot, built on top of page-agent.js. Ask questions about the current page, attach files, and chat with any AI model — no function/tool calling required.
R package expanding integrative analysis capabilities of Seurat by providing seamless access to popular integration methods and to an integration benchmarking toolkit.
Universal sync/async local/cloud path library with pathlib-compatible interface for Python
A specialized large language model for clinical reasoning and diagnosis of rare diseases
A modern static site generator by the Material for MkDocs team
Open-source command-line tool to run batch computing tasks and workflows on backend services such as Google Cloud.
Jan is an open source alternative to ChatGPT that runs 100% offline on your computer.
Declarative creation of composable visualization for Python (Complex heatmap, Upset plot, Oncoprint and more~)
An R package for enrichment (over-representation) analysis of gene sets.
A Python CLI that wraps common Linux commands for both local and cloud files
Unbearably fast near-real-time pure-Python runtime-static type-checker.
Fast and accurate AI powered file content types detection
scplotter is an R package that is built upon plotthis. It provides a set of functions to visualize single-cell sequencing and spatial data in an easy and efficient way.
plotthis is an R package that is built upon ggplot2 and other plotting packages.
Open source implementation of AlphaFold3