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The swiss army knife of lossless video/audio editing

TypeScript 43,046 2,125 Updated Aug 19, 2026

A comprehensive memory system for Cursor IDE that provides both short-term session memory and long-term persistent memory without relying on external tools or databases.

Shell 35 1 Updated Apr 16, 2025

If using CLINE/RooCode/Cursor/Windsurf Setup these rules. Usable for newbies riding AI wave and experienced folks both . Combines: (1) Memory,(2) Reasoning into subtasks (3) Prompts for best practi…

1,059 138 Updated Jul 17, 2025

SortMeRNA: next-generation sequence filtering and alignment tool

C++ 1 Updated Oct 26, 2022

A comprehensive machine learning repository containing 30+ notebooks on different concepts, algorithms and techniques.

Jupyter Notebook 5,035 836 Updated Sep 22, 2023

freeCodeCamp.org's open-source codebase and curriculum. Learn math, programming, and computer science for free.

TypeScript 454,341 46,014 Updated Aug 19, 2026

Demonstrating best practices for bioinformatics command line tools

Shell 115 25 Updated Sep 25, 2020

A collection of resources on modern C++

HTML 13,131 1,233 Updated Aug 20, 2024

A post sequencing QC tool for Oxford Nanopore sequencers

JavaScript 119 14 Updated Jul 8, 2026

Statistical Analysis of RNA-Seq Tools

R 111 69 Updated Oct 9, 2025

Bash/Zsh function for extract: .zip, .rar, .bz2, .gz, .zlib, .tar, .tbz2, .tgz, .Z, .7z, .xz, .exe, .tar.bz2, .tar.gz, .tar.xz, etc.

Shell 521 86 Updated Aug 19, 2026

A curated list of nextflow based pipelines

631 96 Updated Jun 23, 2025

A DSL for data-driven computational pipelines

Groovy 3,468 803 Updated Aug 20, 2026

An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)

C++ 2,418 383 Updated Jul 30, 2026

Bioconvert is a collaborative project to facilitate the interconversion of life science data from one format to another.

Python 393 46 Updated Apr 4, 2026

A framework for 3D printable optomechanics

OpenSCAD 30 4 Updated May 20, 2018

A modern LaTeX Beamer theme

TeX 6,873 860 Updated Nov 23, 2022

FastQC port to Qt5: A quality control tool for high throughput sequence data.

C++ 113 24 Updated Aug 4, 2020

C++ code for the loon problem of the google hashcode

C++ 1 Updated Jan 12, 2017

Mapping-Assisted Targeted-Assembly for Metagenomics

Python 27 12 Updated Mar 28, 2025

de novo sequence assembler using string graphs

C++ 244 81 Updated Aug 8, 2019

Genome assembly evaluation tool

AMPL 518 90 Updated Jun 10, 2026

GATB Minia assembly pipeline

Perl 32 7 Updated Feb 2, 2023

ContigSearch

Java 1 1 Updated Feb 5, 2016

A collection of useful scripts to analyse and format popular bioinformatic files, mainly dealing with NGS

Python 2 Updated Mar 9, 2025

Development version of SortMeDNA

C++ 2 Updated Sep 23, 2015

This is ongoing development of SortMeRNA. For the latest release, see http://bioinfo.lifl.fr/RNA/sortmerna/.

C++ 3 Updated Oct 26, 2022

SeqAn's official repository.

C++ 503 172 Updated Aug 11, 2026
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