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  • Francis Crick Institute
  • London, England
  • LinkedIn in/qin-yu

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@FrancisCrickInstitute @conda-forge @kreshuklab @bioimage-io @diz-lab

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Starred repositories

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Ultralytics YOLO πŸš€

Python 58,543 11,216 Updated Jun 18, 2026

Compress tool outputs, logs, files, and RAG chunks before they reach the LLM. 60-95% fewer tokens, same answers. Library, proxy, MCP server.

Python 34,398 2,319 Updated Jun 18, 2026

A continuation of HomeBox the inventory and organization system built for the Home User

Go 6,328 438 Updated Jun 16, 2026

Claude Code is an agentic coding tool that lives in your terminal, understands your codebase, and helps you code faster by executing routine tasks, explaining complex code, and handling git workflo…

Python 133,225 21,538 Updated Jun 18, 2026

A new AList Fork to Anti Trust Crisis

Go 23,110 2,052 Updated Jun 18, 2026

Search infrastructure for AI

Rust 28,481 2,331 Updated Jun 18, 2026

Backstage is an open framework for building developer portals

TypeScript 33,647 7,412 Updated Jun 18, 2026

Model Context Protocol Servers

TypeScript 87,424 11,027 Updated Jun 17, 2026

A single CLAUDE.md file to improve Claude Code behavior, derived from Andrej Karpathy's observations on LLM coding pitfalls.

178,328 18,209 Updated Apr 20, 2026

A comprehensive solution for using the latest VS Code Remote-SSH extension with CentOS 7.9 servers by automatically patching library dependencies

Shell 12 2 Updated Jun 29, 2025

Dear ImGui: Bloat-free Graphical User interface for C++ with minimal dependencies

C++ 73,930 11,831 Updated Jun 18, 2026

R formatter and language server

Rust 433 30 Updated Jun 18, 2026
Jupyter Notebook 7 2 Updated May 26, 2026

Agent Package Manager

Python 2,935 243 Updated Jun 18, 2026

GitHub Action to setup a headless display on Linux and Windows (not needed on MacOS)

Python 32 5 Updated May 11, 2026

A collection of useful .gitignore templates

174,494 82,398 Updated May 21, 2026

Create useful .gitignore files for your project

Swift 8,710 690 Updated Dec 23, 2024

πŸ€– Dependabot's core logic for creating update PRs.

Ruby 5,649 1,430 Updated Jun 18, 2026

Home of the Renovate CLI: Cross-platform Dependency Automation by Mend.io

TypeScript 21,809 3,118 Updated Jun 18, 2026

Zotero MCP: Connects your Zotero research library with Claude and other AI assistants via the Model Context Protocol to discuss papers, get summaries, analyze citations, and more.

Python 3,887 338 Updated Jun 9, 2026

🌸 A command-line fuzzy finder

Go 81,070 2,796 Updated Jun 15, 2026

Documentation for AI OnDemand (AIoD)

1 Updated Mar 26, 2026

🟩⬜ Generates a snake game from a github user contributions graph and output a screen capture as animated svg or gif

TypeScript 5,891 2,254 Updated Apr 29, 2026

πŸ“… Embed github contributions chart as image

Ruby 966 58 Updated Mar 19, 2024

Your own personal AI assistant. Any OS. Any Platform. The lobster way. 🦞

TypeScript 379,404 79,423 Updated Jun 18, 2026

a graphical plugin for fiji

Java 1 Updated Nov 17, 2025

Collection of awesome medical dataset resources.

1,981 185 Updated Jan 23, 2025
Python 85 10 Updated Aug 27, 2025
Python 212 51 Updated Jul 23, 2025

A foundation model-driven whole slide image-scale cell phenotyping method with QuPath integration Resources

Python 28 1 Updated Jun 17, 2026
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