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aft-pytorch Public
Unofficial PyTorch implementation of Attention Free Transformer (AFT) layers by Apple Inc.
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torch-efa Public
PyTorch implementation of Euclidean Fast Attention and Euclidean RoPE
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RNAPro Public
Forked from NVIDIA-Digital-Bio/RNAProRNAPro is a state-of-the-art RNA 3D folding model developed in collaboration with the hosts and winners of the Stanford RNA 3D Folding Kaggle competition.
Python Apache License 2.0 UpdatedJan 17, 2026 -
Megatron-LM Public
Forked from NVIDIA/Megatron-LMOngoing research training transformer models at scale
Python Other UpdatedJan 8, 2026 -
involution_pytorch Public
Unofficial PyTorch implementation of the Involution layer from CVPR 2021
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nequix Public
Forked from atomicarchitects/nequix[NeurIPS'25 AI4Mat] Nequix: Training a foundation model for materials on a budget.
Python MIT License UpdatedNov 17, 2025 -
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rna-backbone-design Public
Source code for RNA-FrameFlow: SE(3) Flow Matching for 3D RNA Backbone Design
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tabasco Public
Forked from carlosinator/tabascoA Fast, Simplified Model for Molecular Generation with Improved Physical Quality
Python MIT License UpdatedOct 1, 2025 -
Megatron-MoE-ModelZoo Public
Forked from yanring/Megatron-MoE-ModelZooBest practices for training DeepSeek, Mixtral, Qwen and other MoE models using Megatron Core.
Python MIT License UpdatedSep 19, 2025 -
all-atom-diffusion-transformer Public
Forked from facebookresearch/all-atom-diffusion-transformerOfficial implementation of All Atom Diffusion Transformers (ICML 2025)
Python Other UpdatedSep 4, 2025 -
progen3 Public
Forked from Profluent-AI/progen3Public Release of ProGen3 family of Models
Python Apache License 2.0 UpdatedApr 25, 2025 -
WassersteinFlowMatching Public
Forked from DoronHav/WassersteinFlowMatchingJupyter Notebook MIT License UpdatedApr 4, 2025 -
Graph-and-Geometric-Learning.github.io Public
Forked from Graph-and-Geometric-Learning/Graph-and-Geometric-Learning.github.ioHTML MIT License UpdatedFeb 28, 2025 -
equiformer Public
Forked from atomicarchitects/equiformer[ICLR 2023 Spotlight] Equiformer: Equivariant Graph Attention Transformer for 3D Atomistic Graphs
Python MIT License UpdatedFeb 11, 2025 -
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cbb575-final-project Public
Source code for CBB575 final project on Brain Glioblastoma scRNA-seq gene expression analysis
Python MIT License UpdatedDec 15, 2024 -
cbb740-final-project Public
Final project source code for CBB740: Intro to Health Informatics
Python MIT License UpdatedDec 11, 2024 -
hyperbolic-transformer Public
Forked from Graph-and-Geometric-Learning/hyperbolic-transformerPython MIT License UpdatedDec 10, 2024 -
lupus-rnaseq Public
Data viz code for CBB575 final project on gene expression analysis for Lupus Nephritis
MIT License UpdatedNov 18, 2024 -
geometric-algebra-transformer Public
Forked from Qualcomm-AI-research/geometric-algebra-transformerPython BSD 3-Clause Clear License UpdatedSep 10, 2024 -
RFdiffusion Public
Forked from RosettaCommons/RFdiffusionCode for running RFdiffusion
Python Other UpdatedAug 26, 2024 -
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ProteinMPNN Public
Forked from dauparas/ProteinMPNNCode for the ProteinMPNN paper
Jupyter Notebook MIT License UpdatedAug 14, 2024 -
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ma4270-project Public
Source code for MA4270: Data Modelling and Computation on Transformers and Nadaraya-Watson Kernel Regression
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