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backpropagating through memories
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backpropagating through memories

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Starred repositories

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Public repository for ShapeMapper 2 releases

C++ 43 22 Updated Mar 20, 2026

code for adjoint-based diffusion samplers

Python 42 3 Updated Nov 24, 2025

Generative model for protein binder design for protein and small molecule targets. Combines a pretrained flow-based generative model (built on La-Proteina) with inference-time optimization.

Python 202 22 Updated Mar 17, 2026

Code and website for Self-Flow: Self-Supervised Flow Matching for Scalable Multi-Modal Synthesis

Python 379 13 Updated Mar 15, 2026

Equivariant Steerable CNNs Library for Pytorch https://quva-lab.github.io/escnn/

Python 511 61 Updated Oct 31, 2024

Implementation for Discrete Feynman-Kac Correctors

Python 11 1 Updated Jan 19, 2026

Build compute kernels and load them from the Hub.

Python 521 56 Updated Mar 20, 2026

An implementation of 'simple diffusion: End-to-end diffusion for high resolution images' as published by Hoogeboom et al.

Python 40 6 Updated Feb 9, 2025

RNAdvisor is a docker-based wrapper that integrates other metrics and scoring functions for RNA 3D structure evaluation.

Python 16 2 Updated May 6, 2025

AlphaFast: ultra-high-throughput AlphaFold3 inference with MMSeqs2-GPU

Python 106 11 Updated Mar 19, 2026

Fast and accurate coarse-grained neural network molecular dynamics

Python 9 Updated Feb 27, 2026

A minimal PyTorch re-implementation of AlphaFold2's model & training

Python 452 54 Updated Mar 19, 2026

Synthesizable 3D Molecule Generation via Joint Reaction and Coordinate Modeling

Python 18 1 Updated Mar 3, 2026

The GraphBench package.

Python 28 7 Updated Mar 3, 2026

[ICLR 2026] Oversmoothing, “Oversquashing”, Heterophily, Long-Range, and more: Demystifying Common Beliefs in Graph Machine Learning

Jupyter Notebook 3 Updated Feb 6, 2026

[ICLR'25 Oral] Representation Alignment for Generation: Training Diffusion Transformers Is Easier Than You Think

Python 1,583 81 Updated Mar 16, 2025

An easy (and fast) API for popular 3D molecular datasets!

Python 46 4 Updated Feb 27, 2026

Official repository of Zatom-1, a multimodal flow foundation model for 3D molecules and materials

Python 34 8 Updated Mar 5, 2026

High-performance operations for neural network potentials

C++ 102 18 Updated Feb 4, 2026

NVIDIA FastGen: Fast Generation from Diffusion Models

Python 639 46 Updated Mar 19, 2026

Timewarp is a research project using deep learning to accelerate molecular dynamics simulation.

Python 60 8 Updated Aug 21, 2024

Benchmark for generative models for materials

Python 38 3 Updated Mar 10, 2026

Energy-guided binder design pipeline built on BindCraft

Python 17 3 Updated Jun 6, 2025

Origin-1: a generative AI platform for de novo antibody design against novel epitopes

51 10 Updated Jan 15, 2026

Universal interatomic potentials for advanced materials modeling

Python 175 14 Updated Mar 13, 2026

RNAPro is a state-of-the-art RNA 3D folding model developed in collaboration with the hosts and winners of the Stanford RNA 3D Folding Kaggle competition.

Python 73 16 Updated Jan 17, 2026

Space group equivariant crystal diffusion [NeurIPS 2025]

Python 22 1 Updated Sep 20, 2025
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