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8 stars written in Java
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Logstash - transport and process your logs, events, or other data

Java 14,829 3,497 Updated Apr 10, 2026

Welcome to the AWS Code Examples Repository. This repo contains code examples used in the AWS documentation, AWS SDK Developer Guides, and more. For more information, see the Readme.md file below.

Java 10,391 5,845 Updated Apr 10, 2026

Official code repository for GATK versions 4 and up

Java 1,933 625 Updated Apr 11, 2026

cBioPortal for Cancer Genomics

Java 993 851 Updated Apr 10, 2026

Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations

Java 727 405 Updated Apr 11, 2026

Java utilities for Bioinformatics

Java 520 134 Updated Mar 25, 2026

Simple test framework for Nextflow pipelines

Java 182 42 Updated Mar 19, 2026

VarSim: A high-fidelity simulation validation framework for high-throughput genome sequencing with cancer applications

Java 93 31 Updated Oct 3, 2024