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  • Tsinghua University
  • Beijing, China.
  • X @YBSong4

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Starred repositories

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Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking

Python 1,566 359 Updated May 2, 2025

深度学习100例、深度学习DL、图片分类、目标识别、目标检测、自然语言处理nlp、文本分类、TensorFlow、PyTorch

Jupyter Notebook 3,172 503 Updated Sep 22, 2025

R Package for Codon Usage Bias Analysis. Comprehensive documentation and tutorials are available at:

R 11 3 Updated Oct 29, 2025

Rich is a Python library for rich text and beautiful formatting in the terminal.

Python 57,070 2,290 Updated Jun 23, 2026

a JavaScript DNA, RNA, and protein sequence viewer

TypeScript 328 67 Updated Aug 10, 2026

Nature Biotechnology: Ultra-fast, sensitive detection of protein remote homologs using deep dense retrieval

Python 125 11 Updated Jun 28, 2026

TOGA (Tool to infer Orthologs from Genome Alignments): implements a novel paradigm to infer orthologous genes. TOGA integrates gene annotation, inferring orthologs and classifying genes as intact o…

Python 211 26 Updated Nov 23, 2025

An R package for performing association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using STAARpipeline

R 78 26 Updated May 29, 2026

博客转载项目(将在线的博客转化为markdown格式文件),支持CSDN、博客园、简书以及印象笔记的导出文件

Python 24 7 Updated Aug 21, 2024

Declarative creation of composable visualization for Python (Complex heatmap, Upset plot, Oncoprint and more~)

Python 320 14 Updated Aug 14, 2026

🆓免费的 ChatGPT 镜像网站列表,持续更新。List of free ChatGPT mirror sites, continuously updated.

Python 21,226 1,399 Updated Jun 23, 2025

Foldseek enables fast and sensitive comparisons of large structure sets.

C 1,280 156 Updated Aug 11, 2026

Run current & prior versions of R using docker. rocker/r-ver, rocker/rstudio, rocker/shiny, rocker/tidyverse, and so on.

Shell 498 203 Updated Aug 14, 2026

GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools

R 42 4 Updated May 24, 2026

Package for fetching metadata and downloading data from SRA/ENA/GEO

Python 369 68 Updated Aug 11, 2026

code996 web端实现

TypeScript 1,537 55 Updated Jul 18, 2026

Geoms to plot networks with ggplot2

HTML 154 29 Updated May 9, 2026

Add zoomed inset panels to your ggplot maps

R 38 Updated Mar 25, 2026

小程序雷达:AI 驱动的小程序技术选型、趋势追踪和迁移诊断工具

TypeScript 51,191 9,005 Updated Aug 7, 2026

Convert dataframe to YAML. It supports multi-level hierarchy.

R 3 Updated Jan 26, 2023

Set of icons representing programming languages, designing & development tools

CSS 11,772 2,448 Updated Jun 9, 2026

rrapply: revisiting base-R's rapply

R 62 2 Updated Nov 24, 2025

DEbPeak - Analyze and integrate multi-omics to unravel the regulation of gene expression.

HTML 8 1 Updated Sep 11, 2025

Add tooltips in Shiny apps with hint.css

R 40 2 Updated Jul 2, 2025

Contribute Packages to Bioconductor

150 34 Updated May 29, 2026

Area-Proportional Euler and Venn Diagrams with Ellipses

R 150 20 Updated Aug 14, 2026

ggpie - A ggplot2 extension to create pie, donut and rose pie plot

R 50 4 Updated Oct 30, 2023

Visualize and annotate genomic coverage with ggplot2

R 272 24 Updated Jan 24, 2025

Find homologous gene pairs between two species in docker with blast+ (在Docker中使用blast+查找两个物种之间的同源基因对)

Python 1 Updated Mar 28, 2019

Programmer's guide about how to cook at home.

101,791 11,081 Updated Aug 9, 2026
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