Stars
A unifying representation of single cell expression profiles that quantifies similarity between expression states and generalizes to represent new studies without additional training.
BRAID is a department within Genentech dedicated to advancing biological and clinical sciences through artificial intelligence.
Fast and Accurate ML in 3 Lines of Code
📚 Collaborative cheatsheets for console commands
🛠️ ❤️ Want to know NixOS & Flakes in detail? Looking for a beginner-friendly tutorial? Then you've come to the right place! 想要学习使用 NixOS 与 Flakes 吗？在寻找一份新手友好的教程？那你可来对地方了！
Intelligent automation and multi-agent orchestration for Claude Code
Compendium of tools for the Imaging Platform
End-to-end processing of high throughput microscopy. Developed as part of the Swain Lab's time lapse microscopy methods.
Deploy and access image and data processing models from different environments.
A versatile information retrieval framework for evaluating profile strength and similarity (Nat Comms, 2025)
CUDA-accelerated 3D BioImage Computing (ICCV BIC 2025)
Find profile pairs and compute retrieval metrics between them.
xRFM: Accurate, scalable, and interpretable feature learning models for tabular data
Morphological features from images and masks made easy.
An awesome collection of dimensionality reduction resources.
📄 Configuration files that enhance Cursor AI editor experience with custom rules and behaviors
A toolkit for processing, analyzing, and managing optical pooled screening (OPS) image data.