Ivy includes 2 command line tools:
ivyis detection tool for RNA editing events.edit_benchis benchmarking tool to test the detection accuracy.
- Python 2.7+ (v2.7.5 recomended)
- Unix like operating system (tested by OS X 10.9 and RedHat)
The required dependencies to install the Ivy is pysam, pyVCF, fisher, and matplotlib.
pip install numpy
pip install matplotlib
python setup.py install
Ivy is available under the GPLv2 license. See the LICENSE file for more information.