Turn complex codebases into clear, navigable architecture diagrams with Claude Code.

Imputation reference panels for HLA-E, -F, -G and MICAB

A self-improving RLM agent for coding workflows and long-running autonomous tasks.

A 2.78-trillion-parameter Kimi K3 running inference on a single CPU in 8.24 GB of RAM. Portable C99: no BLAS, no framework, no GPU.

A DBI-compliant interface to PostgreSQL

Distributed execution for duckdb queries.

Tiny Pointer Hash Table

Easy bindings between Lean and Python.

Foundations for the Rust omics ecosystem.

Reference implementation and examples of the CuTe Layout representation and algebra.

Generate tests from examples using 'roxygen' and 'testthat'

pangenome alignment, implicit/explicit graph, and variants for human pangenome project release 2

1-code framework: docs, C-library, and tools

GC-biased gene conversion, the recombination requirement, and Lewontin's paradox of variation — manuscript + Lean 4 formalization

A very fast interval tree data structure

Filesystem built upon libcurl.

Matrix-free linear operators for R. Define an operator by its action, compose it lazily, and carry capabilities together with the evidence behind them.

A strict, expression-oriented functional-rewrite language for computer algebra.

Analysis of subclonal copy number alterations (CNA) and loss of heterozygosity (LOH) in cancer

LoGicAl: Local ancestry and genotype calling uncertainty-aware ancestry-specific allele frequency estimation from admixed samples

The textbuf which drives fred

Event-sourced graph runtime for durable and stateful agents

Genie: Fast and Robust Hierarchical Clustering