Toward High-Accuracy Open-Source Biomolecular Structure Prediction.

composite-objective protein design

Versatile open-source tool for microbiome analysis

Repository for "NucleoBench: A Large-Scale Benchmark of Neural Nucleic Acid Design Algorithms"

React + Next.js template for research websites (for PhD students, researchers, etc)

Democratizing Deep-Learning for Drug Discovery, Quantum Chemistry, Materials Science and Biology

The Rosetta Bio-macromolecule modeling package. Available through license with the University of Washington.

Multi-modal Molecule Structure-text Model for Text-based Editing and Retrieval, Nat Mach Intell 2023 (https://www.nature.com/articles/s42256-023-00759-6)

Adding additonal instructions and edited files

Making Protein folding accessible to all!

Materials used and developed for teaching

Code for the ProteinMPNN paper

A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking

The world’s fastest framework for building websites.

Open source code for AlphaFold 2.

A fast and sensitive gapped read aligner

A small library for automatical adjustment of text position in matplotlib plots to minimize overlaps.

HMS Research Computing User Training

Generate and perturb protein structural ensembles using the ExProSE algorithm