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Bulked-Segregant Analysis using vcf file with or without parents

Perl 3 Updated Jul 23, 2021

Here, we sequence and de novo assemble chromosome-scale genomes of nine wild species and two cultivated accessions of tomato and constructed a pan-genome, revealing phylogenetic relationships and s…

Perl 2 1 Updated Apr 23, 2022

深度学习500问,以问答形式对常用的概率知识、线性代数、机器学习、深度学习、计算机视觉等热点问题进行阐述,以帮助自己及有需要的读者。 全书分为18个章节,50余万字。由于水平有限,书中不妥之处恳请广大读者批评指正。 未完待续............ 如有意合作,联系scutjy2015@163.com 版权所有,违权必究 Tan 2018.06

JavaScript 1 Updated Apr 10, 2022

Here, we de novo assembled 110 representative Setaria accessions from a worldwide collected 1,844 variteies, and performed pan-/graph- genome studies, as well as demographic and genetic studies of …

HTML 30 9 Updated Sep 13, 2023

Fast and accurate de novo assembler for long reads

C 405 54 Updated May 10, 2024

GCModeller: genomics CAD(Computer Assistant Design) Modeller system in .NET language

Visual Basic .NET 37 10 Updated Aug 18, 2026

Awesome resources on Bioinformatics, data science, machine learning, programming language (Python, Golang, R, Perl) and miscellaneous stuff.

763 181 Updated Apr 27, 2026

Tools for working with SAM/BAM data

D 613 103 Updated Dec 22, 2024

Create interactive web graphics from R via plotly's JavaScript graphing library

R 1 Updated May 5, 2016

📊 A universal enrichment tool for interpreting omics data

R 1,225 267 Updated Aug 14, 2026

A cross-platform, efficient and practical CSV/TSV toolkit in Golang

Go 1,166 96 Updated Jul 29, 2026

A cross-platform and ultrafast toolkit for FASTA/Q file manipulation

Go 1,589 184 Updated Jul 8, 2026