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written in Perl
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MITObim - mitochondrial baiting and iterative mapping
Create a pseudohaploid assembly from a partially resolved diploid assembly
The final version 2 release of our software to detect core genes in eukaryotic genomes
Assessing genome assemblies using K-mer copies in assemblies and K-mer abundance in Illumina reads
Ancient perl modules developed at TIGR for genomic data processing, still used by some legacy code but until now passed around privately among TIGR ex-employees like the last Twinkies on earth.