Detecting contamination in NGS data and multi-species analysis
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Nov 4, 2024 - HTML
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bwa
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Bulk Rna-seq Analysis
r tcga gene-expression r-markdown bash-script rna-seq-analysis bwa fastqc gdc-portal trimmomatic getx deseq2-analysis featurescount
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Nov 14, 2024 - HTML
Bioinformatics pipeline for Illumina human exome variant calling using FastQC, Trimmomatic, BWA, Samtools, Bcftools, and SnpEff. Demonstrates a reproducible workflow for NGS data analysis. #bioinformatics #genomics #variant-calling #ngs #pipeline
bioinformatics pipeline genomics reproducible-research ngs conda shell-script variant-calling illumina samtools bwa bcftools exome-sequencing portfolio-project snpeff
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May 16, 2025 - HTML
Genomic Analysis Pipeline: Automate data preprocessing, variant calling, and annotation with Snakemake. Ensure reproducibility and reliability in genomic studies.
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May 3, 2024 - HTML
Variantes genéticas de amostras de Rattus norvegicus utilizando GATK4
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Feb 24, 2021 - HTML
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