Stars
A pipeline that accurately simulates high quality publicly cancer genomes (VCFs, CNAs and SVs).
Single-Base Substitution Mutational Signature Inference for WES and MSK-IMPACT
Bootstrap resample your low-powered RNA-Seq data set to estimate the expected reliability of downstream differential expression and enrichment results.
Decima is a Python library to train sequence models on single-cell RNA-seq data.
Synthetic mutational catalogs and evaluation of tools for fitting mutational signatures
The harmonic mean p-value for combining dependent tests
Synthesize functional scoring enrichment results from several sources (GSEApy, ClusterProfiler, STRING)
A Python module for parallel optimization of expensive black-box functions
Joyplots in Python with matplotlib & pandas 📈