CytoCompare: an R Package for Computational Comparisons of Cytometry Profiles.

Repository for projects developed within the lab of JJ. Garcia-Vallejo

Workshop for Bioconductor conference, Seattle 10-12 August 2026.

Sources for a Bioc2026 workshop on ontology for genomic data science with ontoProc2

Workshop Materials for Introductory Bioconductor 2026 workshop

A guide for building Tercen modules

Modern, high-performance flow cytometry tooling for the Rust ecosystem.

The repository for 2026 August spectral flow cytometry workshop at Digital Research Skills Network in Westmead Institute for Medical Research.

An R Interactive Shiny Application for the Analysis of Imaging and Conventional Flow Cytometry

Image Processing tools for Imaging Flow Cytometry

Data for Imaging Flow Cytometry

Anything Yuchen's spectral flow analysis workflows. Including template scripts of comparing spectral profiles, spectral unmixing, statistics around evaluation of unmixing, downstream analysis: data…

Quick tool to export your custom R cytometry gating pipeline to FlowJo Workspace

Single-cell RNAseq materials derived from the 2023 ISMB OSCA workshop in the carpentries workbench format.

R-OMIQ interoperability for gating

Flow cytometry data analysis with R

Doom in R

R package containing functions for analysis of flow cytometry data.

Visualized QC data for the Cytek instruments.

Visualized QC data for the Cytek instruments.

CyStainer package for cytometry marker imputation

A short script for converting .csv file data into an .fcs file, and vise versa.

PaCMAP: Large-scale Dimension Reduction Technique Preserving Both Global and Local Structure

Robust Integration of Single-Cell Cytometry Datasets