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Showing results

🏷 Visualize and optionally limit the size of your Pull Requests

Shell 393 75 Updated Apr 9, 2026
Python 10 11 Updated Nov 6, 2025

🤗 smolagents: a barebones library for agents that think in code.

Python 27,934 2,699 Updated Jun 16, 2026

This repository contains the Hugging Face Agents Course.

MDX 29,451 2,107 Updated Jun 5, 2026

A DSL for data-driven computational pipelines

Groovy 3,414 784 Updated Jun 19, 2026

Drawing centromere constriction at chromosome ideograms, plotted with karyoploteR package from R

HTML 2 Updated May 10, 2022

Run INSERT-seq as an nf-core pipeline

Nextflow 1 Updated Dec 20, 2021

Stochastic Testing and Input Manipulation for Unbiased Learning Systems

Nextflow 31 15 Updated Apr 30, 2026

A pipeline to run and systematically evaluate Multiple Sequence Alignment (MSA) methods.

Nextflow 41 14 Updated May 29, 2026

Functionality for working with pipeline and sample sheet schema files in Nextflow pipelines

Groovy 53 31 Updated May 7, 2026

Simple test framework for Nextflow pipelines

Java 188 44 Updated Apr 27, 2026

A Nextflow plugin to estimate the CO₂ footprint of pipeline runs.

HTML 27 12 Updated Jun 10, 2026

Params validation plugin for Nextflow pipelines

Groovy 48 18 Updated Aug 7, 2024

A pipeline for the analysis of CRISPR edited data. It allows the evaluation of the quality of gene editing experiments using targeted next generation sequencing (NGS) data (`targeted`) as well as t…

Nextflow 61 37 Updated Apr 30, 2026

Repository to host tool-specific module files for the Nextflow DSL2 community!

Nextflow 1 Updated Dec 16, 2025

Python package with helper tools for the nf-core community.

Python 1 Updated Apr 24, 2026

Python package with helper tools for the nf-core community.

Python 312 245 Updated Jun 19, 2026

Repository to host tool-specific module files for the Nextflow DSL2 community!

Nextflow 417 1,068 Updated Jun 19, 2026