Main InChI repository

MOLSIM is an interoperable domain ontology designed to semantically represent platform-agnostic biomolecular simulations as FAIR (Findable, Accessible, Interoperable, and Reusable) datasets. This o…

Prediction and curation of semantic mappings in SSSOM

Python Packaging User Guide

A linter for scientific manuscripts

Super Finto: Semantic Adventure

Project that collects all possible used IUPAC names in literature into a CCZero database.

Thesaurus and controlled vocabulary browser using SKOS and SPARQL

A CLI tool to automatically add type annotations into Python code. Must have tool for annotating existing code.

🤖 Just a command runner

Leveraging BERT and c-TF-IDF to create easily interpretable topics.

Document of the work done by NFDI Section (Meta)Data Working Group on Ontology Harmonization and Mapping

A formatter for reStructuredText

Organisation of the ENERO Foundry

for issuing unique IDs for document control

A domain-agnostic extension of the DCAT Application Profile. It allow providing domain-specific metadata for the processes and agents involved in the creation of a dataset as well as for the entiti…

Central repository for PhyloPic

Create and run uv scripts with POSIX standardized shebang line

NFDI Core Ontology

⚡ A fast Git hook manager written in Rust, designed as a drop-in alternative to pre-commit, reimagined.

The Terminology Service Suite project is a collection of interactive widgets designed to ease the integration of terminology service functions into third-party applications.

Demo UI: https://ts4nfdi.github.io/api-gateway

The TS4NFDI Service Portal.

Service Portal deployment configuration

This is an extension of the DCAT Application Profile PLUS LinkML schema. It is intended to be used by NFDI4Chem & NFDI4Cat as a core that can further be extended in profiles/schemas to provide chem…

MiTO, the Mention Typing Ontology, is an ontology written in OWL 2 DL. Its aim is to enable the formalization of the concept of mentions.

The Intrinsically Disordered Proteins Ontology, a standardized vocabulary for intrinsically disordered proteins

Generalist and Lightweight Model for Named Entity Recognition (Extract any entity types from texts)

CDE Mapper is an automated concept linking tool to find appropriate standardized terms in OMOP Athena vocabularies for clinical terms in data dictionary. The mapping tool is built with advanced Ret…