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1. nf-core/callingcards nf-core/callingcards Public

   A pipeline for processing calling cards data

   Nextflow 5 3

2. callingCardsTools callingCardsTools Public archive

   A collection of objects and functions to work with calling cards sequencing tools. See docs at https://cmatkhan.github.io/callingCardsTools

   Python

3. BSA BSA Public

   A collection of functions intended to facilitate bulk segregant analysis of cryptococcus neoformans strains associated with capsule formation

   R 1

4. labretriever labretriever Public

   This package defines an extended datacard format based on the Huggingface datacard specification that allows for the precise documentation of experimental data with complex heterogenous designs. It…

   Python 2

5. BrentLab/Dual_Threshold_Optimization BrentLab/Dual_Threshold_Optimization Public

   Dual Threshold Optimization compares two ranked lists of features (e.g. genes) to determine the rank threshold for each list that minimizes the hypergeometric p-value of the overlap of features. It…

   Rust 4 2

6. BrentLab/tfbpshiny BrentLab/tfbpshiny Public

   A shiny app to explore a collection of yeast binding and perturbation data collected by the brent lab

   Python 2