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Showing results

Understand How to Interpret the Coefficients of a Categorical Linear Model

R 10 1 Updated Apr 27, 2022

It discovers linear dependent columns and then replaces linear dependent columns with linearly independent columns that span the space of the original columns. This results in a full rank matrix t…

R 16 1 Updated Jul 4, 2024

A curated list of projects related to the reMarkable tablet

7,502 258 Updated Jun 5, 2026

A script for synchronizing the reMarkable e-reader

Jupyter Notebook 99 9 Updated May 6, 2022

Apps Script library for synchronising Google Drive folder with Remarkable reader.

JavaScript 120 17 Updated Nov 28, 2022

A Python implementation of the LEMUR algorithm for analyzing multi-condition single-cell RNA-seq data.

Jupyter Notebook 28 4 Updated Jan 3, 2025

Genomic Features in Python from BioConductor's AnnotationHub

Python 23 5 Updated Jun 15, 2026

💌 Create simple, beautiful personal websites and landing pages using only R Markdown.

HTML 588 98 Updated Jul 21, 2025

Python implementation of Milo for differential abundance testing on KNN graph

Jupyter Notebook 84 9 Updated Feb 17, 2025

Aligning gene expression trajectories of single-cell reference and query systems

Jupyter Notebook 89 13 Updated Aug 10, 2025

Multi-resolution Variational Inference

Python 23 8 Updated May 25, 2026

A library of free open source icons for science illustrations in biology and chemistry

Vue 1,679 96 Updated Jun 18, 2026

pycisTopic is a Python module to simultaneously identify cell states and cis-regulatory topics from single cell epigenomics data.

Jupyter Notebook 81 20 Updated Jun 17, 2026

Cross referencing for Google Docs

JavaScript 89 26 Updated Jun 12, 2025

Single-cell perturbation analysis

Python 329 60 Updated Jun 16, 2026

Multimodal datasets, in MuData format

Python 5 1 Updated Jan 13, 2023

Cookiecutter template for scverse

Python 89 18 Updated Jun 18, 2026

Performant Pythonic GenomicRanges

Python 495 50 Updated Apr 23, 2026

Multimodal Data (.h5mu) implementation for Python

Python 122 23 Updated Jun 17, 2026

Statistical Rethinking course winter 2022

R 4,103 434 Updated Mar 15, 2022

Deep probabilistic analysis of single-cell and spatial omics data

Python 1,644 461 Updated Jun 18, 2026

Multi-omic velocity inference

Python 118 11 Updated Oct 23, 2024

Guide for getting a gig as a tech student.

7,656 701 Updated Apr 21, 2025

Multiome GRN inference.

R 136 24 Updated Apr 10, 2026

All code associated with manuscript detailing scATAC and scRNA-seq following stimulus of PBMCs

R 41 13 Updated Mar 20, 2023
Python 47 8 Updated Jan 28, 2026

muon is a multimodal omics Python framework

Python 271 36 Updated May 8, 2026
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