Skip to content
View katesedykh's full-sized avatar

Block or report katesedykh

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Maximum 250 characters. Please don’t include any personal information such as legal names or email addresses. Markdown is supported. This note will only be visible to you.
Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse
katesedykh/README.md

Hi, I'm Ekaterina

Machine Learning Engineer | Biomedical AI Specialist

Welcome to my GitHub profile! I am a passionate Machine Learning Engineer specializing in AI for medicine. With diverse experiences across various research labs and projects, I am dedicated to leveraging AI for better healthcare solutions.

About Me

  • Interests: AI in Medicine, Deep Learning, Data Analysis, Generative Models, Medical Imaging πŸ“Š
  • πŸ€– Bridging AI research and real-world healthcare applications
  • 🌍 Open to collaborations in AI for Health, Medical Data Science, and Computer Vision

🏒 Professional Experience

  • Biomedical Computer Vision Group, University of Tartu: Synthetic CT generation using diffusion models to address data scarcity in medical imaging.
  • CVLab, EPFL: Universal model development for 3D cardiac segmentation from CT & MRI scans.
  • InsureVision: Real-time accident prediction using video transformers.
  • Alpha3D: 3D model generation from 2D images, leveraging deep learning for e-commerce.
  • WENN ASA: Image-based damage detection with deep learning in production environments.
  • iCV Research Lab: Visual data analysis, 3D modeling, and anomaly detection.

πŸŽ“ Education

  • M.Sc. in Life Science Engineering with Data Science Minor - EPFL (2022-2024)
  • M.Sc. in Computer Science with AI Specialization - University of Tartu (2022-2024)
  • B.Sc. in Bioengineering and Robotics - University of Tartu (2019-2022)

πŸ”§ Skills

  • Languages & Frameworks: Python, PyTorch, MATLAB, Linux, Git
  • Other Skills: AWS, Wet-lab Biology, Teamwork, Time Management, Teaching

πŸ“ Projects

Detailed analysis and innovative approaches in projects like

  • 3D GANs for Medical Image Synthesis
  • Cell Instance Segmentation
  • Classification of Medical Specialties through Clinical Text Analysis
  • Graph Neural Networks for Immunotherapy Response Prediction
  • Smoking Trends Visualization
  • and more

πŸ“¬ Contact Me

Feel free to connect with me!

Exploring the intersection of technology and healthcare to create a better future with AI!

Pinned Loading

  1. jbr-ai-labs/SimpleDH3 jbr-ai-labs/SimpleDH3 Public

    Code for "Simple End-to-end Deep Learning Model for CDR-H3 Loop Structure Prediction" paper. Machine Learning for Structural Biology (MLSB) Workshop at NeurIPS 2021

    Python 7 3

  2. magnuskarlson/diabetes-prediction magnuskarlson/diabetes-prediction Public

    Jupyter Notebook 1

  3. GaNDLF GaNDLF Public

    Forked from mlcommons/GaNDLF

    A generalizable application framework for segmentation, regression, and classification using PyTorch

    Python

  4. neuro-cell-segmentation neuro-cell-segmentation Public

    Neuronal cell segmentation

    Jupyter Notebook