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Starred repositories

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Data Hub makes lab instrument data instantly accessible to people, pipelines, and agents

TypeScript 14 2 Updated Aug 7, 2026

Agentic plugins to annotate SDRF using Claude; Codex; Cursor; Gemini

Python 11 10 Updated Aug 11, 2026

Linked Open Data Modeling Language

Python 591 188 Updated Aug 11, 2026

Interaction Fingerprints for protein-ligand complexes and more

Python 530 100 Updated Aug 1, 2026

This is a convenient code wrapper to run Lundberg lab SubCell model in inference with your own images

Python 9 6 Updated Jul 16, 2026

Defining Quality Control Standards for Single-Cell Proteomics by Inter-Laboratory Benchmarking

Jupyter Notebook 2 Updated Jul 28, 2026

Analysis platform for large-scale dose-dependent data

Python 30 7 Updated Nov 25, 2025

Official, Anthropic-managed directory of high quality Claude Code Plugins.

Python 33,408 3,768 Updated Aug 11, 2026

Open source repository of plugins primarily intended for knowledge workers to use in Claude Cowork

Python 23,433 2,826 Updated Aug 11, 2026

Public repository for Agent Skills

Python 168,009 20,019 Updated Aug 7, 2026

Turn any workflow into reusable AI agent skills that install on 17 platforms — Claude Code, Copilot, Cursor, Windsurf, Codex, Gemini, Kiro, and more. One SKILL.md, every platform.

Python 2,214 249 Updated Aug 11, 2026

The open agent skills tool - npx skills

TypeScript 28,667 2,429 Updated Aug 10, 2026

LiveBench: A Challenging, Contamination-Free LLM Benchmark

Python 1,277 115 Updated Aug 10, 2026
Python 213 14 Updated Dec 20, 2024

OIN-SMILES will be a standalone, open-source Python library capable of lossless conversion between 3D XYZ structures and 1D SMILES strings.

Python 10 2 Updated Aug 1, 2026

A meticulously curated resource list focused on computational methods for drug discovery.

138 40 Updated Jul 30, 2026
Jupyter Notebook 10 Updated Jul 17, 2026

A python library with scripts and helpers classes for quantms workflow

Python 7 5 Updated May 19, 2026

Makes your AI agent think like the laziest senior dev in the room. The best code is the code you never wrote.

JavaScript 100,715 5,546 Updated Aug 7, 2026
Python 100 62 Updated Aug 11, 2026

Democratizing AI scientists with ToolUniverse

Python 1,622 245 Updated Aug 11, 2026

Automate seekr handling with seekrflow to decrease time and manual intervention to complete seekr calculations.

Python 24 6 Updated Aug 11, 2026

quantms workflow for DIANN tool including DIA and DDA analysis

Nextflow 18 6 Updated Aug 9, 2026

Benchmarking tools and analysis scripts for processing and evaluating structural data from the OpenBind EV-A71 2A dataset

Python 51 3 Updated May 21, 2026

Persistent project memory for AI coding agents. Structured scaffold + drift detection CLI.

TypeScript 1,424 99 Updated Aug 8, 2026

Query Zarr stores with SQL directly from DuckDB

Rust 41 1 Updated Aug 4, 2026

Foldseek enables fast and sensitive comparisons of large structure sets.

C 1,278 156 Updated Aug 11, 2026

Visualization of Mass Spectrometry Data

Python 1 Updated Jun 4, 2026

Omics Data Discovery Agents

Python 16 4 Updated Jul 20, 2026
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