OpenTofu lets you declaratively manage your cloud infrastructure.

Docker image with GATK and bwa

A centralized location for storing curated data from cBioPortal

Educational materials for learning WDL

Repository to keep track of commonly used elements of computational workflows, e.g. Nextflow and Cromwell

Official code repository for GATK versions 4 and up

Analysis of subclonal copy number alterations (CNA) and loss of heterozygosity (LOH) in cancer

Microsoft Genomics implementation of the Broad Institute's Cromwell workflow engine on Azure

Easily run WDL workflows on GCP

Elastic, reproducible, and reusable genomic data science tools from R backed by cloud resources

📐 Jekyll theme for building a personal site, blog, project documentation, or portfolio.

A collection of reusable WDL tasks. Category:Other

Specification for the Workflow Description Language (WDL).

Workflow Description Language developer tools & local runner

Paws, a package for Amazon Web Services in R

Docker image running BWA

strelka in docker

Ontology for consent codes and data use requirements

A community R package

Docker container with STAR and samtools

Amazon Simple Storage Service (S3) API Client

utilities for cromwell hackathon

A curated collection of Nextflow implementation patterns