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Starred repositories

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An AI-powered literature review assistant for researchers

Python 48 3 Updated May 7, 2026
Jupyter Notebook 2 Updated Jul 27, 2026

Python On Resonance (PyOR), a versatile NMR simulator

Python 13 Updated Aug 7, 2026

🎨 Toolkit for generating publication-quality plots for Cell, Nature and Science journals

Python 615 67 Updated Aug 10, 2026

A curated list of awesome plugins, themes, agents, projects, and resources for https://opencode.ai

JavaScript 9,500 731 Updated Jul 3, 2026

The Monte Carlo Diffusion and Collision simulator (MC/DC), is a C++ open-source Diffusion-Weighted Magnetic Resonance Imaging (DW-MRI) Monte Carlo Simulator.

C++ 27 15 Updated Jul 1, 2026

Non-parametric T2 relaxometry methods for myelin water quantification

Python 14 7 Updated Sep 7, 2023

Never stop coding. Free MIT AI gateway: one endpoint, 290+ providers (90+ free), 500+ models — Kimi, Claude, GPT, OpenAI, Gemini, GLM, DeepSeek, MiniMax. Works with Claude Code, Codex, Cursor, Open…

TypeScript 45,560 6,122 Updated Aug 11, 2026

Single-nucleus RNA sequencing (snRNA-seq) data of the human postmortem uncinate fasciculus.

R 2 Updated Mar 16, 2026

The awesome collection of OpenClaw skills. 5,400+ skills filtered and categorized from the official OpenClaw Skills Registry.🦞

51,882 4,997 Updated Aug 9, 2026

Stand alone fMRI software suite for layer-fMRI analyses.

C++ 116 29 Updated Jun 29, 2026

The open source coding agent.

TypeScript 196,051 25,146 Updated Aug 11, 2026

A web-based memory usage and performance calculator for Huggingface GGUF models

JavaScript 27 1 Updated Jul 20, 2026

brain connectivity toolbox for python

Python 348 152 Updated Jul 8, 2026

Eigent: The Open Source Cowork Desktop - Local and Free Alternative to Claude Cowork and Codex

TypeScript 14,931 1,769 Updated Aug 11, 2026

The open-source alternative to Claude Cowork (powered by opencode)

TypeScript 21,828 2,144 Updated Aug 11, 2026

Your own personal AI assistant. Any OS. Any Platform. The lobster way. 🦞

TypeScript 385,896 81,094 Updated Aug 11, 2026

Automatically assign tags to papers with the help of LLM

TypeScript 28 4 Updated Jul 31, 2026

Spatial Single Cell Analysis in Python

Python 589 118 Updated Aug 11, 2026

GPU-acceleration routines for DifferentialEquations.jl and the broader SciML scientific machine learning ecosystem

Julia 325 41 Updated Aug 5, 2026

Massively parallel Monte Carlo diffusion MR simulator written in Python.

Python 30 9 Updated Nov 2, 2024

Estimation of network statistics of the Hopf whole-brain model using a linear noise approximation

MATLAB 11 2 Updated Jan 31, 2024

Koma is a GPU-accelerated, Pulseq-compatible framework for simulating Magnetic Resonance Imaging (MRI) acquisitions. The primary focus of this package is to simulate the wide range of scenarios enc…

Julia 215 47 Updated Aug 11, 2026

Public-facing repository for Preclinical MRI pulse sequences developed by Matt Budde, Medical College of Wisconsin

11 1 Updated Mar 2, 2026

R library for structural neuroimaging. Provides high-level functions to access (read and write) and visualize surface-based brain morphometry data for individuals and groups.

R 77 15 Updated Aug 9, 2026

Simulation of diffusion MRI sequences and PSF characterization

MATLAB 13 1 Updated Apr 29, 2025

yet another brain plot - beautiful brain visualisations for the cortex, subcortex, and tracts.

Python 134 19 Updated Jul 24, 2026

Similarity network fusion in Python

Python 93 27 Updated Apr 8, 2020

Optimized cerebral cortical surface mapping of neurite properties using diffsion magnetic resonace imaging (dMRI)

Shell 16 8 Updated May 16, 2023
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