Maragkakis lab
Tools developed by the Maragkakis lab. These tools are made available here without any guarantee of support
- 4 followers
- Baltimore, MD
- https://maragkakislab.com
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Repositories
Showing 10 of 16 repositories
- rnakinet Public
RNAkinet: Detect 5eu-modified reads directly from the raw nanopore sequencing signal to quantify RNA kinetics
- wf-module-ensembl Public
A snakemake workflow that is intended to be consumed by other workflows allowing download of ENSEMBL reference files
- wf-module-dorado Public
A snakemake workflow that is intended to be consumed by other workflows allowing basecalling of Oxford Nanopore files with dorado
- wf-ml-markers-senescence Public
Detecting cellular senescence using transcriptomic and proteomic data.
- nanoplen Public
Package for the analysis of the nanopore read lengths, e.g. to calculate the significant differential transcript length.
- rnakinet-pub Public
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