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Systematic failure during ABFE setup with GROMACS KCl systems

Status: Open.

#1318 In choderalab/yank;

· MartinFuentetaja opened on Jan 30, 2026

Can Yank prepare a mixed solvent system?

Status: Open.

#1317 In choderalab/yank;

· yt203y opened on Sep 24, 2025

How to get 181L-pdbfixer.pdb in example folder?

Status: Open.

#1316 In choderalab/yank;

· mainguyenanhvu opened on Sep 12, 2025

High energy when applying restraint in one phase

Status: Open.

#1315 In choderalab/yank;

· jbodosa opened on Apr 10, 2025

Problem facing while generating Boresch restraints

Status: Open.

#1313 In choderalab/yank;

· shilpa888 opened on Oct 18, 2024

YANK Support for Multiple Conformational States

Status: Open.

#1312 In choderalab/yank;

· mmahmedgithub opened on Jun 21, 2024

Calculate Free binding energy without schrodingers suite

Status: Open.

#1311 In choderalab/yank;

· FlorianSchustek3T opened on Feb 28, 2024

Clarification on why vacuum simulation needed for hydration free energy

Status: Open.

#1310 In choderalab/yank;

· zanebeckwith opened on Dec 12, 2023

leap returned non-zero exit status 31

Status: Open.

#1309 In choderalab/yank;

· sobertie opened on Dec 11, 2023

Varying free energy estimates depending on sampler used

Status: Open.

#1307 In choderalab/yank;

· thomas-elix opened on Dec 11, 2023

support Membrane Protein Systems ?

Status: Open.

#1306 In choderalab/yank;

· ErikZhang-9762 opened on Nov 29, 2023

Silent GAFF2 failures can happen easily

Status: Open.

#1304 In choderalab/yank;

· simonaxelrod opened on Jul 10, 2023