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Recombination Landscape Estimation using Recurrent Neural Networks

Python 67 14 Updated Mar 27, 2026

BRAKER re-implemented with snakemake

Python 42 8 Updated May 17, 2026

SearXNG is a free internet metasearch engine which aggregates results from various search services and databases. Users are neither tracked nor profiled.

Python 30,145 2,873 Updated May 17, 2026

A collection of DESIGN.md files inspired by popular brand design systems. Drop one into your project and let coding agents generate a matching UI.

80,449 9,719 Updated May 17, 2026

Package for fetching metadata and downloading data from SRA/ENA/GEO

Python 358 66 Updated Dec 9, 2025

A new high-resolution long-read metagenome assembler for even noisy reads

Rust 148 7 Updated Apr 5, 2026

Use Codex from Claude Code to review code or delegate tasks.

JavaScript 18,927 1,117 Updated Apr 18, 2026

Zotero MCP: Connects your Zotero research library with Claude and other AI assistants via the Model Context Protocol to discuss papers, get summaries, analyze citations, and more.

Python 3,167 285 Updated Apr 9, 2026

Unofficial Python API and agentic skill for Google NotebookLM. Full programmatic access to NotebookLM's features—including capabilities the web UI doesn't expose—via Python, CLI, and AI agents like…

Python 13,440 1,881 Updated May 18, 2026

Get your documents ready for gen AI

Python 59,897 4,151 Updated May 17, 2026

Ghostty-based macOS terminal with vertical tabs and notifications for AI coding agents

Swift 17,254 1,349 Updated May 18, 2026

👻 Ghostty is a fast, feature-rich, and cross-platform terminal emulator that uses platform-native UI and GPU acceleration.

Zig 54,748 2,726 Updated May 18, 2026

⚡A CLI tool for code structural search, lint and rewriting. Written in Rust

Rust 13,853 360 Updated May 18, 2026

Google Workspace CLI — one command-line tool for Drive, Gmail, Calendar, Sheets, Docs, Chat, Admin, and more. Dynamically built from Google Discovery Service. Includes AI agent skills.

Rust 26,332 1,377 Updated May 12, 2026

Terminal-Bench-Science: Evaluating AI Agents on Complex Real-World Scientific Workflows in the Terminal

Python 76 43 Updated May 14, 2026

A claude code skill to delegate prompts to codex

1,248 93 Updated Apr 27, 2026

BayesCode, a Bayesian framework for phylogenetic comparative methods and phylogenetic codon models

C++ 11 2 Updated Apr 30, 2025
Vue 2 Updated May 11, 2026

Burning through your subscriptions too fast? Paying for stuff you never use? Stop guessing. OpenUsage is free and open source.

JavaScript 2,490 229 Updated May 14, 2026

🎃 A fast, out-of-the-box terminal built for AI coding.

Rust 5,080 249 Updated May 17, 2026

The most customizable typing website with a minimalistic design and a ton of features. Test yourself in various modes, track your progress and improve your speed.

TypeScript 20,009 3,169 Updated May 17, 2026

PaperBanana: Automating Academic Illustration For AI Scientists

Python 6,331 467 Updated May 11, 2026

Skills Catalog for Codex

Python 19,414 1,287 Updated May 15, 2026

A 5-20x faster experimental Homebrew alternative

Rust 7,270 169 Updated May 7, 2026

The open source coding agent.

TypeScript 161,800 19,030 Updated May 18, 2026

User-friendly GUI macOS application for Homebrew Casks

Swift 6,751 174 Updated May 10, 2026

🤱🏻 Turn any webpage into a desktop app with one command.

Rust 48,772 9,847 Updated May 17, 2026

🐹 Deep clean and optimize your Mac.

Shell 51,699 1,623 Updated May 18, 2026

Your agent in your terminal, equipped with local tools: writes code, uses the terminal, browses the web. Make your own persistent autonomous agent on top!

Python 4,302 388 Updated May 18, 2026

Genomic Annotation Visualization R package.

R 3 Updated Jan 31, 2026
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