deMULTIplex2: robust sample demultiplexing for scRNA-seq

Compendium of available lists of ligand-receptor pairs and surface-secreted protein interactions.

Discrete differential geometry in Python. Derived from CMU and Caltech Codebases and Published papers

🧬 immunarch [R package] – Multi-Modal Immune Repertoire Analytics for Immunotherapy and Vaccine Design

Reference mapping for single-cell genomics

Alleloscope is a method for allele-specific copy number estimation that can be applied to single cell DNA and ATAC sequencing data (separately or in combination). Allele-specific estimation allows …

The materials for the Deep Learning in Biology workshop put on by Alex Lee, David Nicholson, and Ben Heil