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a versatile tool for detecting copy number changes from exome-seq data

R 1 Updated Jan 7, 2014

High speed p-value computation for regulatory SNP detection using Motif information

R 2 2 Updated Apr 28, 2021

Config files used to define parameters specific to compute environments at different Institutions

Nextflow 1 Updated Nov 12, 2025

Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing

Nextflow 1 Updated Sep 16, 2021

DoWhy is a Python library for causal inference that supports explicit modeling and testing of causal assumptions. DoWhy is based on a unified language for causal inference, combining causal graphic…

Python 4 Updated Jan 17, 2024

An R package for inferring the subclonal architecture of tumors

R 1 Updated Mar 1, 2016