Easy Metagenome Pipeline

High-Performance Scientific Modeling with Julia and SciML

Bin Chicken - recovery of low abundance and taxonomically targeted metagenome assembled genomes (MAGs) through strategic coassembly

SIB course on bayesian statistics with applications using Rstan

A Hierarchical Softmax Framework for PyTorch

Orthoflow is a workflow for phylogenetic inference of genome-scale datasets of protein-coding genes.

Repository for codes, analyses and visualizations for the CAMI II challenges

Transposable Element Repeat Result classifIER

A metagenomic workflow to recover chloroplast genomes

Course website "Biodiversity bioinformatics: from large-scale phylogenomics to gene families and functions"

Applied Metagenomics