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  1. Anaerobutyricum_Gut_Project Anaerobutyricum_Gut_Project Public

    Metagenomic analysis of A. hallii in early-stage metabolic syndrome

    R

  2. CRC_Phage_Immune_Exhaustion CRC_Phage_Immune_Exhaustion Public

    Computational dissection of F. nucleatum-driven Wnt/Hedgehog hyperactivation in Colorectal Cancer, mapping the downstream HBEGF autocrine and GDF15 immune-tolerance networks.

    R

  3. MLH1_VUS_Reclassification MLH1_VUS_Reclassification Public

    Computational reclassification of Variants of Uncertain Significance within the MLH1 ATPase domain to map Lynch syndrome susceptibility.

    Python

  4. Computational_Immunology_Sandbox Computational_Immunology_Sandbox Public

    A multi-language bioinformatics pipeline (Bash, R, Python) for single-cell RNA-seq analysis of the Melanoma tumor microenvironment. Identifies CD8+ T-cell exhaustion signatures and statistically va…

    Python

  5. Microbiome-Trm-Crosstalk-scRNAseq Microbiome-Trm-Crosstalk-scRNAseq Public

    scATAC-seq pipeline mapping mucosal immunity and host-microbe crosstalk. Profiles physical chromatin accessibility of Trm cells (Itgae/CD103) and Secretory IgA Plasma cells (Igj) to decode intestin…

    R

  6. SHERLOCK-GBA SHERLOCK-GBA Public

    An integrated computational pipeline for CRISPR-Cas13a (SHERLOCK) malaria diagnostics and trans-kingdom neuro-immune mapping, linking PfK13-driven pathogen detection to microglial homeostatic (CX3C…

    R