Center for Precision Medicine and Genomics
- 4 followers
- New York City
- http://www.columbiamedicine.org/cpmg/
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CRAFTs-Indel
CRAFTs-Indel PublicThis repo contains the scripts for CRAFTS-indel and the results shared in its associated paper.
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systemPipeRNAseq_workflow_for_single_end_reads
systemPipeRNAseq_workflow_for_single_end_reads PublicThis repo contains a modified workflow to run systemPipeRNAseq workflow on single end reads on the mouse reference genome.
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structural_variant_truncator
structural_variant_truncator PublicConverts PennCNV structural variants to smaller individual variants. Typically used to convert large genotyped SVs to exon sized SVs.
Python
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Repositories
- systemPipeRNAseq_workflow_for_single_end_reads Public
This repo contains a modified workflow to run systemPipeRNAseq workflow on single end reads on the mouse reference genome.
- Variant_Annotations_ClinVar_gnomAD Public
This repo contains a script to run variant annotation on a file that contains list of variants.
- genelists Public
- CRAFTs-Indel Public
This repo contains the scripts for CRAFTS-indel and the results shared in its associated paper.
- vntrwrap Public Forked from alexliyihao/vntrwrap
An implementation for Protein-coding repeat polymorphisms strongly shape diverse human phenotypes paper code
- arisLIMS Public
- liftOverCNV Public
- structural_variant_truncator Public
Converts PennCNV structural variants to smaller individual variants. Typically used to convert large genotyped SVs to exon sized SVs.
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